MCCE Documentation

MCCE Documentation

What is MCCE?

• Multi-Conformation Continuum Electrostatics - MCCE

• MCCE Mechanism

MCCE Success Stories

• Proton Loading Sites in Complex I

• MCCE Hydrogen Bond Characterization

• Photosystem II Analysis

Quick Start

• Install MCCE

• A simple MCCE example of pH titration

Turtorials

• Calculate pKas of Lysozyme - a 4-step process

• Calculate Em of heme in Cytochrome

• Compute hydrogen bond network

• Sampling more rotamers at "hot" spots

• Gromacs Quick Start
  

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• Gromacs Server
  

• Example 1: Lysozyme
  

• Example 2: Biphasic Systems

• Microstate Tools Tutorial

• Run MCCE on Multiple PDBs at Once
  

Knowledgebase

• MCCE Commands

• MCCE How Tos

• Other HOW-TOs

• Microstate Analysis Library

• Interprete MCCE Results